Check the protein buffer. Phosphate buffers at pH 7.5-8.0 and HEPES buffers are appropriate, whereas Tris-Cl buffer should be avoided.
50-100 mg of proteins in 100 μL 20 mM HEPES (pH 7.5) buffer are treated with 5 μL of 2.3% freshly prepared glutaraldehyde solution for 10 minutes on ice. Chiou et al. (2006) suggested that the added amount of glutaraldehyde is calculated as equal moles of cross-linker reactive groups.
The reaction is terminated by the addition of 10 μL of 1 M Tris-Cl (pH 8.0).
The cross-linked sample will be characterized using SDS-PAGE, SEC, and negative-stain EM.
Notes
The crosslinkers need to react with proteins free from amines.